A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv623655



Internal ID15822228
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:113308960..113394480hg38UCSC Ensembl
Outerchr13:113963275..114048795hg19UCSC Ensembl
Outerchr13:113011276..113096796hg18UCSC Ensembl
Outerchr13:113011276..113096796hg17UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg385406
hg195406
hg185406
hg175406
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv509521
Supporting Variants
SamplesNA18994
Known GenesGRTP1, LAMP1
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv623655
Frequency
Sample Size4
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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