A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv623005



Internal ID15821578
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:47486211..47492211hg38UCSC Ensembl
Outerchr7:47525809..47531809hg19UCSC Ensembl
Outerchr7:47492334..47498334hg18UCSC Ensembl
Outerchr7:47299049..47305049hg17UCSC Ensembl
Cytoband7p12.3
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv507387
Supporting Variants
SamplesNA18994
Known GenesTNS3
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv623005
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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