A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv622870



Internal ID15821443
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:126229851..126235851hg38UCSC Ensembl
Outerchr3:125948694..125954694hg19UCSC Ensembl
Outerchr3:127431384..127437384hg18UCSC Ensembl
Outerchr3:127431392..127437392hg17UCSC Ensembl
Cytoband3q21.2
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv507124
Supporting Variants
SamplesNA18994
Known Genes
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv622870
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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