A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv622455



Internal ID15821028
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:32025590..32067218hg38UCSC Ensembl
Outerchr3:32067082..32108710hg19UCSC Ensembl
Outerchr3:32042086..32083714hg18UCSC Ensembl
Outerchr3:32042086..32083714hg17UCSC Ensembl
Cytoband3p22.3
Allele length
AssemblyAllele length
hg3841629
hg1941629
hg1841629
hg1741629
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv508216
Supporting Variants
SamplesNA18994
Known Genes
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv622455
Frequency
Sample Size4
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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