A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv622437



Internal ID15817662
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr22:23820277..24047055hg38UCSC Ensembl
Outerchr22:24162464..24443517hg19UCSC Ensembl
Outerchr22:22492464..22773517hg18UCSC Ensembl
Outerchr22:22487018..22768071hg17UCSC Ensembl
Cytoband22q11.23
Allele length
AssemblyAllele length
hg38226779
hg19281054
hg18281054
hg17281054
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv511075
Supporting Variants
SamplesNA10860
Known GenesCABIN1, DDT, DDTL, DERL3, GSTT1, GSTT2, GSTT2B, GSTTP1, GSTTP2, LOC284889, LOC391322, MIF, SLC2A11, SMARCB1
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv622437
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex1
Frequencyn/a


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