A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv622415



Internal ID15470954
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:14832232..15381350hg38UCSC Ensembl
Outerchr16:14926089..15475207hg19UCSC Ensembl
Outerchr16:14833590..15382708hg18UCSC Ensembl
Outerchr16:14833590..15382708hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg38549119
hg19549119
hg18549119
hg17549119
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv511045
Supporting Variants
SamplesNA10860
Known GenesLOC100288162, MIR1972-1, MIR1972-2, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR3180-4, MIR6511A-2, MIR6511B-1, MIR6770-2, NOMO1, NPIPA1, NPIPA5, NTAN1, PDXDC1, RRN3
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv622415
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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