A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv622391



Internal ID15817616
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:70681298..70762126hg38UCSC Ensembl
Outerchr9:73296214..73377042hg19UCSC Ensembl
Outerchr9:72486034..72566862hg18UCSC Ensembl
Outerchr9:70525768..70606596hg17UCSC Ensembl
Cytoband9q21.11
Allele length
AssemblyAllele length
hg3880829
hg1980829
hg1880829
hg1780829
Variant TypeOTHER complex
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv510944
Supporting Variants
SamplesNA10860
Known GenesTRPM3
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv622391
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex1
Frequencyn/a


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