A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv622057



Internal ID15817282
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr4:87853807..87859807hg38UCSC Ensembl
Outerchr4:88774959..88780959hg19UCSC Ensembl
Outerchr4:88993983..88999983hg18UCSC Ensembl
Outerchr4:89132138..89138138hg17UCSC Ensembl
Cytoband4q22.1
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv509911
Supporting Variants
SamplesNA10860
Known Genes
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv622057
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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