A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv621700



Internal ID15472237
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:46529369..46535369hg38UCSC Ensembl
Outerchr3:46570859..46576859hg19UCSC Ensembl
Outerchr3:46545863..46551863hg18UCSC Ensembl
Outerchr3:46545863..46551863hg17UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv507093
Supporting Variants
SamplesNA10860
Known GenesLRRC2
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv621700
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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