A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv621117



Internal ID15473781
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:246774411..246839406hg38UCSC Ensembl
Outerchr1:246937713..247002708hg19UCSC Ensembl
Outerchr1:245004336..245069331hg18UCSC Ensembl
Outerchr1:243263754..243328749hg17UCSC Ensembl
Cytoband1q44
Allele length
AssemblyAllele length
hg385801
hg195801
hg185801
hg175801
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv509768
Supporting Variants
SamplesNA15510
Known GenesAHCTF1, LOC149134
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv621117
Frequency
Sample Size4
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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