A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv619770



Internal ID15471665
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:12097920..12235045hg38UCSC Ensembl
Outerchr1:12157977..12295102hg19UCSC Ensembl
Outerchr1:12080564..12217689hg18UCSC Ensembl
Outerchr1:12092243..12229368hg17UCSC Ensembl
Cytoband1p36.22
Allele length
AssemblyAllele length
hg387790
hg197790
hg187790
hg177790
Variant TypeCNV insertion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv508891
Supporting Variants
SamplesNA10860
Known GenesMIR4632, MIR7846, TNFRSF1B, TNFRSF8, VPS13D
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv619770
Frequency
Sample Size4
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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