A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv619145



Internal ID15471040
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:50228994..50234994hg38UCSC Ensembl
Outerchr15:50521191..50527191hg19UCSC Ensembl
Outerchr15:48308483..48314483hg18UCSC Ensembl
Outerchr15:48308483..48314483hg17UCSC Ensembl
Cytoband15q21.2
Allele length
AssemblyAllele length
hg386001
hg196001
hg186001
hg176001
Variant TypeOTHER sequence alteration
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv507779
Supporting Variants
SamplesNA10860
Known GenesSLC27A2
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv619145
Frequency
Sample Size4
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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