A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv618925



Internal ID15818729
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:38779834..38856390hg38UCSC Ensembl
Outerchr15:39072035..39148591hg19UCSC Ensembl
Outerchr15:36859327..36935883hg18UCSC Ensembl
Outerchr15:36859327..36935883hg17UCSC Ensembl
Cytoband15q14
Allele length
AssemblyAllele length
hg3876557
hg1976557
hg1876557
hg1776557
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv510659
Supporting Variants
SamplesNA10860
Known Genes
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv618925
Frequency
Sample Size4
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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