A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv618725



Internal ID15471843
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:146564833..146583690hg38UCSC Ensembl
Outerchr3:146282620..146301477hg19UCSC Ensembl
Outerchr3:147765310..147784167hg18UCSC Ensembl
Outerchr3:147765318..147784175hg17UCSC Ensembl
Cytoband3q24
Allele length
AssemblyAllele length
hg3818858
hg1918858
hg1818858
hg1718858
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv508253
Supporting Variants
SamplesNA10860
Known Genes
MethodOptical mapping
AnalysisSingle-molecule optical maps were assembled into genome-wide consensus maps. These consensus maps were compared to a restriction map generated from the NCBI b35 human genome reference sequence.
PlatformOptical Mapping
Comments
ReferenceTeague_et_al_2010
Pubmed ID20534489
Accession Number(s)nssv618725
Frequency
Sample Size4
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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