A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5980



Internal ID15543385
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:115515234..115525965hg38UCSC Ensembl
Outerchr3:115234081..115244812hg19UCSC Ensembl
Outerchr3:116716771..116727502hg18UCSC Ensembl
Outerchr3:116716771..116727502hg17UCSC Ensembl
Cytoband3q13.31
Allele length
AssemblyAllele length
hg3810732
hg1910732
hg1810732
hg1710732
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv3955
Supporting Variants
SamplesNA19129
Known Genes
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5980
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer