A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5969



Internal ID15196713
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr3:58519895..58560433hg38UCSC Ensembl
Outerchr3:58505622..58546160hg19UCSC Ensembl
Outerchr3:58480662..58521200hg18UCSC Ensembl
Outerchr3:58480662..58521200hg17UCSC Ensembl
Cytoband3p14.2
Allele length
AssemblyAllele length
hg3840539
hg1940539
hg1840539
hg1740539
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv3839
Supporting Variants
SamplesNA19129
Known GenesACOX2
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5969
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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