A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv587



Internal ID15545302
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr6:139280318..139307326hg38UCSC Ensembl
Outerchr6:139601455..139628463hg19UCSC Ensembl
Outerchr6:139643148..139670156hg18UCSC Ensembl
Outerchr6:139643148..139670156hg17UCSC Ensembl
Cytoband6q24.1
Allele length
AssemblyAllele length
hg3827009
hg1927009
hg1827009
hg1727009
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv5501
Supporting Variants
SamplesNA19240
Known GenesTXLNB
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv587
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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