| Internal ID | 15467372 |
| Landmark | |
| Location Information | |
| Cytoband | 22q13.1 |
| Allele length | | Assembly | Allele length | | hg38 | 30288 | | hg19 | 30288 | | hg18 | 30288 |
|
| Variant Type | CNV loss |
| Copy Number | |
| Allele State | |
| Allele Origin | |
| Probe Count | |
| Validation Flag | |
| Merged Status | S |
| Merged Variants | nsv498988 |
| Supporting Variants | |
| Samples | |
| Known Genes | APOBEC3A, APOBEC3A_B, APOBEC3B, APOBEC3B-AS1 |
| Method | Sequencing |
| Analysis | For each individuals we constructed a whole genomic library of approximately 1 million clones using a fosdmid subcloning strategy Paried end sequences from each clone were sequenced and searched against NCBI build35. Individual fosmid clones corresponding to regions of structural difference relative to the genome reference were selected and sequenced. The breakpoints determined from complete fosmid sequencing are given using the NCBI build36 genome assembly. |
| Platform | Capillary |
| Comments | |
| Reference | Kidd_et_al_2010b |
| Pubmed ID | 21111241 |
| Accession Number(s) | nssv585849
|
| Frequency | | Sample Size | 9 | | Observed Gain | 0 | | Observed Loss | 1 | | Observed Complex | 0 | | Frequency | n/a |
|
