A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5654



Internal ID15197094
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr17:36151952..36265379hg38UCSC Ensembl
Outerchr17:34479332..34617648hg19UCSC Ensembl
Outerchr17:31503445..31641761hg18UCSC Ensembl
Outerchr17:31503445..31641761hg17UCSC Ensembl
Cytoband17q12
Allele length
AssemblyAllele length
hg38113428
hg19138317
hg18138317
hg17138317
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv2040
Supporting Variants
SamplesNA19129
Known GenesCCL3L1, CCL3L3, CCL4L1, CCL4L2, TBC1D3B, TBC1D3H
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5654
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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