A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5611



Internal ID15197146
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:70138558..74383341hg38UCSC Ensembl
Outerchr16:70172461..74417239hg19UCSC Ensembl
Outerchr16:68729962..72974740hg18UCSC Ensembl
Outerchr16:68729962..72974740hg17UCSC Ensembl
Cytoband16q22.1
Allele length
AssemblyAllele length
hg384244784
hg194244779
hg184244779
hg174244779
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7285
Supporting Variants
SamplesNA19129
Known GenesAARS, AP1G1, ATXN1L, C16orf47, CALB2, CHST4, CLEC18C, CMTR2, COG4, DDX19A, DDX19B, DHODH, DHX38, EXOSC6, FUK, HCCAT5, HP, HPR, HYDIN, HYDIN2, IL34, IST1, LOC100132529, LOC100506060, LOC100506083, LOC100506172, LOC101928035, LOC283922, MARVELD3, MTSS1L, PDPR, PHLPP2, PKD1L3, PMFBP1, PSMD7, SF3B3, SNORA70D, SNORD111, SNORD111B, SNORD71, ST3GAL2, TAT, TXNL4B, VAC14, VAC14-AS1, ZFHX3, ZNF19, ZNF23, ZNF821
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5611
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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