A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5588



Internal ID15197174
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr16:14895322..14976119hg38UCSC Ensembl
Outerchr16:14989179..15069976hg19UCSC Ensembl
Outerchr16:14896680..14977477hg18UCSC Ensembl
Outerchr16:14896680..14977477hg17UCSC Ensembl
Cytoband16p13.11
Allele length
AssemblyAllele length
hg3880798
hg1980798
hg1880798
hg1780798
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7277
Supporting Variants
SamplesNA19129
Known GenesLOC100288162, MIR3179-1, MIR3179-2, MIR3179-3, MIR3180-1, MIR3180-2, MIR3180-3, MIR6511A-2, MIR6770-2, NOMO1, NPIPA1, PDXDC1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5588
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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