A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5536



Internal ID15543923
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:20535017..22472558hg38UCSC Ensembl
Outerchr15:20740255..22781821hg19UCSC Ensembl
Outerchr15:19000269..20333185hg18UCSC Ensembl
Outerchr15:19000269..20333185hg17UCSC Ensembl
Cytoband15q11.2
Allele length
AssemblyAllele length
hg381937542
hg192041567
hg181332917
hg171332917
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7260
Supporting Variants
SamplesNA19129
Known GenesCT60, CXADRP2, GOLGA6L1, GOLGA6L6, GOLGA8CP, GOLGA8DP, LOC646214, LOC727924, MIR4509-1, MIR4509-2, MIR4509-3, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5536
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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