A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5535



Internal ID15543924
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:20396882..22295298hg38UCSC Ensembl
Outerchr15:20602135..22583249hg19UCSC Ensembl
Outerchr15:18862149..20084613hg18UCSC Ensembl
Outerchr15:18862149..20084613hg17UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg381898417
hg191981115
hg181222465
hg171222465
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7260
Supporting Variants
SamplesNA19129
Known GenesCT60, CXADRP2, GOLGA6L6, GOLGA8CP, HERC2P3, LOC646214, LOC727924, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5535
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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