A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv542022



Internal ID15160970
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:113052193..113103993hg38UCSC Ensembl
Innerchr9:115814473..115866273hg19UCSC Ensembl
Innerchr9:114854294..114906094hg18UCSC Ensembl
Innerchr9:112894028..112945827hg17UCSC Ensembl
Cytoband9q32
Allele length
AssemblyAllele length
hg3851801
hg1951801
hg1851801
hg1751800
Variant TypeCNV loss
Copy Number1
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv466492
Supporting Variants
SamplesHGDP00692
Known GenesZFP37
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nssv542022
Frequency
Sample Size1557
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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