A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv541731



Internal ID15512560
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:4909719..4953916hg38UCSC Ensembl
Innerchr9:4909719..4953916hg19UCSC Ensembl
Innerchr9:4899719..4943916hg18UCSC Ensembl
Innerchr9:4899719..4943916hg17UCSC Ensembl
Cytoband9p24.1
Allele length
AssemblyAllele length
hg3844198
hg1944198
hg1844198
hg1744198
Variant TypeCNV gain
Copy Number3
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv466098
Supporting Variants
SamplesNINDS_34
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nssv541731
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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