A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv541705



Internal ID15503295
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr9:1731076..1759811hg38UCSC Ensembl
Innerchr9:1731076..1759811hg19UCSC Ensembl
Innerchr9:1721076..1749811hg18UCSC Ensembl
Innerchr9:1721076..1749811hg17UCSC Ensembl
Cytoband9p24.3
Allele length
AssemblyAllele length
hg3828736
hg1928736
hg1828736
hg1728736
Variant TypeCNV gain
Copy Number3
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv466067
Supporting Variants
Samples1780862176_A
Known Genes
MethodSNP array
AnalysisAn HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives.
PlatformNot reported
Comments
ReferenceItsara_et_al_2009
Pubmed ID19166990
Accession Number(s)nssv541705
Frequency
Sample Size1557
Observed Gain1
Observed Loss0
Observed Complex0
Frequencyn/a


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