Internal ID | 15159510 |
Landmark | |
Location Information | |
Cytoband | 1p35.2 |
Allele length | Assembly | Allele length | hg38 | 49684 | hg19 | 49684 | hg18 | 49684 | hg17 | 49684 |
|
Variant Type | CNV loss |
Copy Number | 1 |
Allele State | |
Allele Origin | |
Probe Count | |
Validation Flag | |
Merged Status | S |
Merged Variants | nsv461028 |
Supporting Variants | |
Samples | HGDP00433 |
Known Genes | BAI2, COL16A1 |
Method | SNP array |
Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. |
Platform | Not reported |
Comments | |
Reference | Itsara_et_al_2009 |
Pubmed ID | 19166990 |
Accession Number(s) | nssv537481
|
Frequency | Sample Size | 1557 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
|