A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5360



Internal ID15543129
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:61204211..61246417hg38UCSC Ensembl
Outerchr11:60971683..61013889hg19UCSC Ensembl
Outerchr11:60728259..60770465hg18UCSC Ensembl
Outerchr11:60728259..60770465hg17UCSC Ensembl
Cytoband11q12.2
Allele length
AssemblyAllele length
hg3842207
hg1942207
hg1842207
hg1742207
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv339
Supporting Variants
SamplesNA19129
Known GenesPGA3, PGA4, PGA5
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5360
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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