Variant DetailsVariant: nssv534867Internal ID | 15158532 | Landmark | | Location Information | | Cytoband | 17q21.31 | Allele length | Assembly | Allele length | hg38 | 111687 | hg19 | 111687 | hg18 | 111687 | hg17 | 111687 |
| Variant Type | CNV loss | Copy Number | 1 | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | S | Merged Variants | nsv457742 | Supporting Variants | | Samples | HGDP00076 | Known Genes | AARSD1, G6PC, IFI35, PTGES3L, PTGES3L-AARSD1, RPL27, RUNDC1, VAT1 | Method | SNP array | Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. | Platform | Not reported | Comments | | Reference | Itsara_et_al_2009 | Pubmed ID | 19166990 | Accession Number(s) | nssv534867
| Frequency | Sample Size | 1557 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
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