| Internal ID | 15157496 |
| Landmark | |
| Location Information | |
| Cytoband | 17q12 |
| Allele length | | Assembly | Allele length | | hg38 | 61031 | | hg19 | 61031 | | hg18 | 61031 | | hg17 | 61031 |
|
| Variant Type | CNV loss |
| Copy Number | 1 |
| Allele State | |
| Allele Origin | |
| Probe Count | |
| Validation Flag | |
| Merged Status | S |
| Merged Variants | nsv457738 |
| Supporting Variants | |
| Samples | 1780862585_A |
| Known Genes | PGAP3, PNMT, PPP1R1B, STARD3, TCAP |
| Method | SNP array |
| Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. |
| Platform | Not reported |
| Comments | |
| Reference | Itsara_et_al_2009 |
| Pubmed ID | 19166990 |
| Accession Number(s) | nssv534864
|
| Frequency | | Sample Size | 1557 | | Observed Gain | 0 | | Observed Loss | 1 | | Observed Complex | 0 | | Frequency | n/a |
|
