A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5347



Internal ID15543208
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:5762319..5792605hg38UCSC Ensembl
Outerchr11:5783549..5813835hg19UCSC Ensembl
Outerchr11:5740125..5770411hg18UCSC Ensembl
Outerchr11:5740125..5770411hg17UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg3830287
hg1930287
hg1830287
hg1730287
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7654
Supporting Variants
SamplesNA19129
Known GenesOR52N1, OR52N5
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5347
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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