Internal ID | 15165122 |
Landmark | |
Location Information | |
Cytoband | 16p13.3 |
Allele length | Assembly | Allele length | hg38 | 56589 | hg19 | 56589 | hg18 | 56589 | hg17 | 56589 |
|
Variant Type | CNV gain |
Copy Number | 3 |
Allele State | |
Allele Origin | |
Probe Count | |
Validation Flag | |
Merged Status | S |
Merged Variants | nsv457304 |
Supporting Variants | |
Samples | NINDS_149 |
Known Genes | C16orf11, CAPN15, NHLRC4, PIGQ, RAB40C |
Method | SNP array |
Analysis | An HMM examining LogR Ratio and B-allele Frequency was used to classify SNP array data into regions of copy-number 0-3. A combination of manual and automated curation was used on the resulting output to reduce false positives. |
Platform | Not reported |
Comments | |
Reference | Itsara_et_al_2009 |
Pubmed ID | 19166990 |
Accession Number(s) | nssv534521
|
Frequency | Sample Size | 1557 | Observed Gain | 1 | Observed Loss | 0 | Observed Complex | 0 | Frequency | n/a |
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