A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5338



Internal ID15196573
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1879101..1917937hg38UCSC Ensembl
Outerchr11:1900331..1939167hg19UCSC Ensembl
Outerchr11:1856907..1895743hg18UCSC Ensembl
Outerchr11:1856907..1895743hg17UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg3838837
hg1938837
hg1838837
hg1738837
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7643
Supporting Variants
SamplesNA19129
Known GenesLSP1
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5338
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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