A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5302



Internal ID15543370
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:87227293..87399682hg38UCSC Ensembl
Outerchr10:88987050..89159439hg19UCSC Ensembl
Outerchr10:88977030..89149419hg18UCSC Ensembl
Outerchr10:88977030..89149419hg17UCSC Ensembl
Cytoband10q23.2
Allele length
AssemblyAllele length
hg38172390
hg19172390
hg18172390
hg17172390
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7483
Supporting Variants
SamplesNA19129
Known GenesLINC00864, LOC439994, NUTM2A, NUTM2A-AS1, NUTM2D
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5302
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer