A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv5219



Internal ID15544004
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:48343310..48411506hg38UCSC Ensembl
OuterchrX:48202745..48270950hg19UCSC Ensembl
OuterchrX:48087689..48155894hg18UCSC Ensembl
OuterchrX:47958999..48027204hg17UCSC Ensembl
CytobandXp11.23
Allele length
AssemblyAllele length
hg3868197
hg1968206
hg1868206
hg1768206
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7441
Supporting Variants
SamplesNA19129
Known GenesSSX3, SSX4, SSX4B
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv5219
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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