A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv4963



Internal ID15197395
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr7:5942683..6820874hg38UCSC Ensembl
Outerchr7:5982314..6860505hg19UCSC Ensembl
Outerchr7:5948840..6827030hg18UCSC Ensembl
Outerchr7:5755555..6633745hg17UCSC Ensembl
Cytoband7p22.1
Allele length
AssemblyAllele length
hg38878192
hg19878192
hg18878191
hg17878191
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv7392
Supporting Variants
SamplesNA19129
Known GenesAIMP2, ANKRD61, C7orf26, CCZ1B, CYTH3, DAGLB, EIF2AK1, FAM220A, GRID2IP, KDELR2, PMS2, PMS2CL, RAC1, RSPH10B, RSPH10B2, USP42, ZDHHC4, ZNF12, ZNF316, ZNF853
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv4963
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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