A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv471258



Internal ID15041061
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr3:46756350..46805202hg38UCSC Ensembl
Innerchr3:46797840..46846692hg19UCSC Ensembl
Innerchr3:46772844..46821696hg18UCSC Ensembl
Innerchr3:46758432..46807284hg16UCSC Ensembl
Cytoband3p21.31
Allele length
AssemblyAllele length
hg3848853
hg1948853
hg1848853
hg1648853
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv438397
Supporting Variants
Samples
Known Genes
MethodSNP array
AnalysisHardy-Weinberg disequilibrium - we looked for genomic regions in which hetobs/hetexp consistency fell below some cutoff (we used cutoffs of 0.7 and 0.4).
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nssv471258
Frequency
Sample Size269
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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