A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv470914



Internal ID15384076
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr22:22547644..22568655hg38UCSC Ensembl
Innerchr22:22890066..22911060hg19UCSC Ensembl
Innerchr22:21220066..21241060hg18UCSC Ensembl
Innerchr22:21214620..21235614hg16UCSC Ensembl
Cytoband22q11.22
Allele length
AssemblyAllele length
hg3821012
hg1920995
hg1820995
hg1620995
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv438338
Supporting Variants
SamplesNA07055
Known GenesLOC648691, PRAME
MethodSNP array
AnalysisMendelian inconsistencies - for each genotype assay and population sample we defined the Mendel failure pattern of that assay as the binary vector (length 60) of Mendel consistency status across the 60 parent-offspring pair.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nssv470914
Frequency
Sample Size269
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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