A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv470149



Internal ID15386657
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
InnerchrX:28024561..28033373hg38UCSC Ensembl
InnerchrX:28042678..28051490hg19UCSC Ensembl
InnerchrX:27952599..27961411hg18UCSC Ensembl
InnerchrX:27404104..27412916hg16UCSC Ensembl
CytobandXp21.3
Allele length
AssemblyAllele length
hg388813
hg198813
hg188813
hg168813
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv438127
Supporting Variants
SamplesNA18972
Known Genes
MethodSNP array
AnalysisNull genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals.
PlatformNot reported
Comments
ReferenceMcCarroll_et_al_2006
Pubmed ID16468122
Accession Number(s)nssv470149
Frequency
Sample Size269
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer