Variant Details

Variant: nssv470102

Internal ID

15385435

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Inner	chr9:62800846..62819837	hg38	UCSC Ensembl
Inner	chr9:66456670..66481678	hg19	UCSC Ensembl
Inner	chr9:66196490..66221498	hg18	UCSC Ensembl
Inner	chr9:62545375..62570383	hg16	UCSC Ensembl

Cytoband

9q12

Allele length

Assembly	Allele length
hg38	18992
hg19	25009
hg18	25009
hg16	25009

Variant Type

CNV loss

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

nsv438106

Supporting Variants

Samples

NA18500

Known Genes

Method

SNP array

Analysis

Null genotypes - for each genotype assay and population sample we defined the null genotype pattern of that assay as the binary vector (length 90) of null genotype calls across the 90 individuals.

Platform

Not reported

Comments

Reference

McCarroll_et_al_2006

Pubmed ID

16468122

Accession Number(s)

nssv470102

Frequency

Sample Size	269
Observed Gain	0
Observed Loss	1
Observed Complex	0
Frequency	n/a