A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv453187



Internal ID18274221
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr16:33338271..33525548hg38UCSC Ensembl
Innerchr16:33239512..33328015hg19UCSC Ensembl
Innerchr16:33147013..33235516hg18UCSC Ensembl
Cytoband16p11.2
Allele length
AssemblyAllele length
hg38187278
hg1988504
hg1888504
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv428325
Supporting Variants
SamplesHGDP01089
Known GenesLOC390705, TP53TG3, TP53TG3B, TP53TG3C
MethodBAC aCGH
AnalysisCopy number variable segments were automatically detected using the CNVfinder algorithm (Fiegler et al. 2006).
PlatformSanger H. sapiens Whole Genome Tile Path 28.7k v3
Comments
ReferencePerry_et_al_2008b
Pubmed ID18775914
Accession Number(s)nssv453187
Frequency
Sample Size62
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer