A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv452669



Internal ID18274239
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:32111694..32669947hg38UCSC Ensembl
Innerchr15:32403895..32962148hg19UCSC Ensembl
Innerchr15:30191187..30749440hg18UCSC Ensembl
Cytoband15q13.3
Allele length
AssemblyAllele length
hg38558254
hg19558254
hg18558254
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv428302
Supporting Variants
SamplesHGDP01089
Known GenesARHGAP11A, CHRNA7, GOLGA8K, GOLGA8O, GOLGA8R, LOC100996255, SCG5, ULK4P1, ULK4P2, ULK4P3, WHAMMP1
MethodBAC aCGH
AnalysisCopy number variable segments were automatically detected using the CNVfinder algorithm (Fiegler et al. 2006).
PlatformSanger H. sapiens Whole Genome Tile Path 28.7k v3
Comments
ReferencePerry_et_al_2008b
Pubmed ID18775914
Accession Number(s)nssv452669
Frequency
Sample Size62
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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