A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv452539



Internal ID18274745
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr15:19954442..22472558hg38UCSC Ensembl
Innerchr15:20159695..22876631hg19UCSC Ensembl
Innerchr15:18419709..20428072hg18UCSC Ensembl
Cytoband15q11.1
Allele length
AssemblyAllele length
hg382518117
hg192716937
hg182008364
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv428296
Supporting Variants
SamplesNA19108
Known GenesCHEK2P2, CT60, CXADRP2, GOLGA6L1, GOLGA6L6, GOLGA8CP, GOLGA8DP, HERC2P3, LOC646214, LOC727924, MIR4509-1, MIR4509-2, MIR4509-3, NBEAP1, NF1P2, OR4M2, OR4N3P, OR4N4, POTEB, POTEB2, REREP3, TUBGCP5
MethodBAC aCGH
AnalysisCopy number variable segments were automatically detected using the CNVfinder algorithm (Fiegler et al. 2006).
PlatformSanger H. sapiens Whole Genome Tile Path 28.7k v3
Comments
ReferencePerry_et_al_2008b
Pubmed ID18775914
Accession Number(s)nssv452539
Frequency
Sample Size62
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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