A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv450643



Internal ID18274323
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:31262811..31494329hg38UCSC Ensembl
Innerchr6:31230588..31462106hg19UCSC Ensembl
Innerchr6:31338567..31570085hg18UCSC Ensembl
Cytoband6p21.33
Allele length
AssemblyAllele length
hg38231519
hg19231519
hg18231519
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv428140
Supporting Variants
SamplesHGDP01093
Known GenesHCG26, HCP5, HLA-B, HLA-C, MICA, MIR6891
MethodBAC aCGH
AnalysisCopy number variable segments were automatically detected using the CNVfinder algorithm (Fiegler et al. 2006).
PlatformSanger H. sapiens Whole Genome Tile Path 28.7k v3
Comments
ReferencePerry_et_al_2008b
Pubmed ID18775914
Accession Number(s)nssv450643
Frequency
Sample Size62
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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