A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv450614



Internal ID18272992
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Innerchr6:25987185..26351692hg38UCSC Ensembl
Innerchr6:25987413..26351920hg19UCSC Ensembl
Innerchr6:26095392..26459899hg18UCSC Ensembl
Cytoband6p22.1
Allele length
AssemblyAllele length
hg38364508
hg19364508
hg18364508
Variant TypeCNV loss
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv428137
Supporting Variants
SamplesHGDP00449
Known GenesHFE, HIST1H1A, HIST1H1C, HIST1H1D, HIST1H1E, HIST1H1T, HIST1H2AB, HIST1H2AC, HIST1H2AD, HIST1H2AE, HIST1H2BB, HIST1H2BC, HIST1H2BD, HIST1H2BE, HIST1H2BF, HIST1H2BG, HIST1H2BH, HIST1H2BI, HIST1H3A, HIST1H3B, HIST1H3C, HIST1H3D, HIST1H3E, HIST1H3F, HIST1H3G, HIST1H4A, HIST1H4B, HIST1H4C, HIST1H4D, HIST1H4E, HIST1H4F, HIST1H4G, HIST1H4H, TRIM38
MethodBAC aCGH
AnalysisCopy number variable segments were automatically detected using the CNVfinder algorithm (Fiegler et al. 2006).
PlatformSanger H. sapiens Whole Genome Tile Path 28.7k v3
Comments
ReferencePerry_et_al_2008b
Pubmed ID18775914
Accession Number(s)nssv450614
Frequency
Sample Size62
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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