A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv4151



Internal ID15192192
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:43586614..43704382hg38UCSC Ensembl
Outerchr15:43878812..43996580hg19UCSC Ensembl
Outerchr15:41666104..41783872hg18UCSC Ensembl
Outerchr15:41666104..41783872hg17UCSC Ensembl
Cytoband15q15.3
Allele length
AssemblyAllele length
hg38117769
hg19117769
hg18117769
hg17117769
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag1
Merged StatusS
Merged Variantsnsv1514
Supporting Variants
SamplesNA12878
Known GenesCATSPER2, CKMT1A, CKMT1B, PPIP5K1, RNU6-28P, STRC
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv4151
Frequency
Sample Size9
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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