A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv4140



Internal ID15192181
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:2567689..2603549hg38UCSC Ensembl
Outerchr1:2499128..2534988hg19UCSC Ensembl
Outerchr1:2478086..2524848hg18UCSC Ensembl
Outerchr1:2520388..2567150hg17UCSC Ensembl
Cytoband1p36.32
Allele length
AssemblyAllele length
hg3835861
hg1935861
hg1846763
hg1746763
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7171
Supporting Variants
SamplesNA12878
Known GenesFAM213B, LOC100133445, MMEL1, TNFRSF14
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv4140
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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