Variant DetailsVariant: nssv4034491Internal ID | 18951668 | Landmark | | Location Information | | Cytoband | 6p21.33 | Allele length | Assembly | Allele length | hg38 | 113561 | hg19 | 113561 |
| Variant Type | CNV deletion | Copy Number | 1 | Allele State | | Allele Origin | | Probe Count | | Validation Flag | | Merged Status | S | Merged Variants | nsv1161370 | Supporting Variants | | Samples | | Known Genes | ABHD16A, AIF1, APOM, BAG6, C6orf47, CSNK2B, GPANK1, LY6G5B, LY6G5C, LY6G6E, LY6G6F, MIR4646, MIR6832, PRRC2A, SNORA38 | Method | SNP array | Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. | Platform | Affymetrix SNP Array 6.0 | Comments | | Reference | Lou_et_al_2015 | Pubmed ID | 26073780 | Accession Number(s) | nssv4034491
| Frequency | Sample Size | 369 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
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