Internal ID | 18948642 |
Landmark | |
Location Information | |
Cytoband | 12q13.11 |
Allele length | Assembly | Allele length | hg38 | 53451 | hg19 | 53451 |
|
Variant Type | CNV deletion |
Copy Number | 1 |
Allele State | |
Allele Origin | |
Probe Count | |
Validation Flag | |
Merged Status | S |
Merged Variants | nsv1160031 |
Supporting Variants | |
Samples | |
Known Genes | H1FNT |
Method | SNP array |
Analysis | 1) We applied common software Birdsuite to detect genome-wide CNVs; 2) we used our algorithm WinXPCNVer which is based on probe intensity to identify Tibetan specific CNV; 3) we further genotyped the discovered Tibetan specific CNV by K-means and manual observation. |
Platform | Affymetrix SNP Array 6.0 |
Comments | |
Reference | Lou_et_al_2015 |
Pubmed ID | 26073780 |
Accession Number(s) | nssv4031465
|
Frequency | Sample Size | 369 | Observed Gain | 0 | Observed Loss | 1 | Observed Complex | 0 | Frequency | n/a |
|