A curated catalogue of human genomic structural variation




Variant Details

Variant: nssv3993



Internal ID15192034
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:117094591..117209690hg38UCSC Ensembl
Outerchr11:116965307..117080406hg19UCSC Ensembl
Outerchr11:116470517..116585616hg18UCSC Ensembl
Outerchr11:116470517..116585616hg17UCSC Ensembl
Cytoband11q23.3
Allele length
AssemblyAllele length
hg38115100
hg19115100
hg18115100
hg17115100
Variant TypeOTHER inversion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusS
Merged Variantsnsv7223
Supporting Variants
SamplesNA12878
Known GenesLOC100652768, PAFAH1B2, PCSK7, SIDT2, SIK3, TAGLN
MethodSequencing
AnalysisEnd-sequence pairs were mapped to the human genome assembly (hg17) using a previously described algorithm (Tuzun et al 2005)
PlatformCapillary
Comments
ReferenceKidd_et_al_2008
Pubmed ID18451855
Accession Number(s)nssv3993
Frequency
Sample Size9
Observed Gain0
Observed Loss0
Observed Complex0
Frequencyn/a


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